Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain NCTC6267 genome assembly, contig:
Gene Summary
Adenine Count
1265935 bp
Thymine Count
1264576 bp
Guanine Count
1350546 bp
Cytosine Count
1346301 bp
Genome Length
5227358 bp
Protein-coding Genes
5997 genes
Non-Coding Genes
355 genes
# of Chromosomes/Plasmids
10
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| t3ss secretion switching protein sepd | NCTC6267_00939 | Not Available | Positive | 776557 - 777012 | 17392.7 |
| Phage assembly protein | NCTC6267_00940 | Not Available | Positive | 777012 - 778568 | 56776.9 |
| uncharacterised protein | NCTC6267_00941 | Not Available | Positive | 778663 - 778854 | 7303.3 |
| t3ss chaperone cesd | NCTC6267_00942 | Not Available | Positive | 778917 - 779018 | 3882.77 |
| grla, global regulator of lee activator | NCTC6267_00943 | Not Available | Negative | 779082 - 779486 | 15924.5 |
| grlr, global regulator of lee repressor | NCTC6267_00944 | Not Available | Negative | 779590 - 779931 | 12680.8 |
| Putative transglycosylase slt domain protein | NCTC6267_00945 | Not Available | Positive | 780113 - 780574 | 17006.3 |
| t3ss structural protein escu | NCTC6267_00946 | Not Available | Negative | 780571 - 781659 | 41209.1 |
| t3ss structural protein esct | NCTC6267_00947 | Not Available | Negative | 781601 - 782377 | 28581.7 |
| t3ss structural protein escr | NCTC6267_00948 | Not Available | Negative | 782646 - 783065 | 15823.0 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

