Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain AR_0116 plasmid unnamed5, complete
Gene Summary
Adenine Count
27717 bp
Thymine Count
31158 bp
Guanine Count
30758 bp
Cytosine Count
32350 bp
Genome Length
121983 bp
Protein-coding Genes
20 genes
Non-Coding Genes
134 genes
# of Chromosomes/Plasmids
10
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| t3ss structural protein sepq | NCTC6267_00929 | Not Available | Negative | 769728 - 770615 | 33752.7 |
| t3ss component | NCTC6267_00930 | Not Available | Negative | 770602 - 771024 | 16721.3 |
| t3ss component | NCTC6267_00931 | Not Available | Negative | 771017 - 771397 | 15075.4 |
| t3ss translocator escn | NCTC6267_00932 | Not Available | Negative | 771397 - 772737 | 48709.2 |
| t3ss structural protein escv | NCTC6267_00933 | Not Available | Negative | 772721 - 773137 | 15721.2 |
| t3ss structural protein escv | NCTC6267_00934 | Not Available | Negative | 773082 - 774749 | 61536.3 |
| t3ss regulator mpc | NCTC6267_00935 | Not Available | Negative | 774746 - 775099 | 13880.7 |
| sepz | NCTC6267_00936 | Not Available | Positive | 775271 - 775546 | 8616.43 |
| t3ss component | NCTC6267_00937 | Not Available | Positive | 775614 - 775973 | 12697.3 |
| t3ss structural protein escj | NCTC6267_00938 | Not Available | Positive | 776017 - 776310 | 10739.9 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

