Citrobacter koseri ATCC BAA-895

Gram-negativeMotileFacultatively anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Citrobacter

Description

Citrobacter koseri ATCC BAA-895 is a gram-negative, rod-shaped bacterium that thrives at mesophilic temperatures, prefers to utilize organic compounds as a carbon source, and is classified as a facultative anaerobe. This species belongs to the Enterobacteriaceae family and is commonly found in the human gut, as well as in various environmental sources such as soil and water.The gram-negative characteristic of C. koseri signifies a thinner peptidoglycan layer and an outer membrane containing lipopolysaccharides, which contributes to its virulence. Its rod shape is typical of many Enterobacteriaceae, providing mobility and surface area for nutrient absorption. As a mesophilic organism, C. koseri flourishes between 30°C and 37°C, making it well-suited for growth within human body temperatures. The facultative anaerobic nature of this microbe allows it to adapt to both aerobic and anaerobic environments, giving it the flexibility to survive in various ecological niches. C. koseri is predominantly found in the intestinal tracts of humans and animals, where it plays a role in the gut microbiome. It can also be isolated from clinical specimens, particularly in immunocompromised patients, where it is associated with opportunistic infections. Pathogenic strains have been implicated in neonatal meningitis and other serious infections, emphasizing the importance of understanding this bacterium in clinical settings. Additionally, C. koseri exhibits biochemical versatility, which allows it to metabolize a wide range of substrates. This metabolic adaptability, coupled with its potential pathogenicity, makes it a significant subject of research within microbiology and infectious disease studies. Its ability to form biofilms may also contribute to its persistence in hospital environments, where it can pose a risk to vulnerable populations.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusCitrobacter
SpeciesCitrobacter koseri
StrainATCC BAA-895

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityYes
Flagellar presenceYes
Number of membranes2
Ecology, Host, and Life Cycle
Oxygen requirementsFacultatively anaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityYes

Genome Summary

Citrobacter koseri ATCC BAA-895

Accession NumberNC_009794.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

12 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
rop family plasmid primer rna-binding proteinCKO_RS21910Not Available+145 - 3246939.39
hypothetical proteinCKO_RS21915Not Available-352 - 88220562.6
mobc family replication-relaxation proteinCKO_RS21920Not Available-889 - 162027676.5
type iv secretory system conjugative dna transfer family proteinCKO_RS21925Not Available-1620 - 358472706.3
colicin release lysis proteinCKO_RS21930Not Available-5065 - 52145247.55
cloacin immunity family proteinCKO_RS21935Not Available-5299 - 55569994.72
colicin-like bacteriocin trnase domain-containing proteinCKO_RS21940Not Available-5566 - 725159240.3
exc2 family lipoproteinCKO_RS21945Not Available+7654 - 807315660.5
hypothetical proteinCKO_RS21950Not Available+8379 - 86429892.61
type ii toxin-antitoxin system rele/pare family toxinCKO_RS21955Not Available+8632 - 893111410.4

Displaying genes 1 – 10 of 4419 in total

Pathways

3 pathways

Metabolites

7 records
Metabolite IDMetabolite nameStructureCAS number
BASm00027107,8-dihydrofolateC19H19N7O6Chemical structure of 7,8-dihydrofolateNot available
Average441.405Da
Monoisotopic441.1407785Da
BASm00034334-amino-4-deoxychorismateC10H10NO5Chemical structure of 4-amino-4-deoxychorismate133442-18-9
Average224.193Da
Monoisotopic224.056446006Da
BASm00036917,8-dihydroneopterin 3'-phosphateC9H12N5O7PChemical structure of 7,8-dihydroneopterin 3'-phosphateNot available
Average333.1946Da
Monoisotopic333.047434275Da
BASm0014042Oxoglutaric acidC5H6O5Chemical structure of Oxoglutaric acid328-50-7
Average146.0981Da
Monoisotopic146.021523302Da
BASm0014067p-Aminobenzoic acidC7H7NO2Chemical structure of p-Aminobenzoic acid150-13-0
Average137.136Da
Monoisotopic137.047678473Da
BASm0017263NADPC21H29N7O17P3Chemical structure of NADP53-59-8
Average744.4129Da
Monoisotopic744.083277073Da
BASm0017330Tetrahydrofolic acidC19H23N7O6Chemical structure of Tetrahydrofolic acid135-16-0
Average445.4292Da
Monoisotopic445.170981503Da

Displaying 1–7 of 7 metabolites