Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain R47 chromosome R47, complete sequence.
Gene Summary
Adenine Count
1194081 bp
Thymine Count
1197968 bp
Guanine Count
1278424 bp
Cytosine Count
1281634 bp
Genome Length
4952107 bp
Protein-coding Genes
4493 genes
Non-Coding Genes
240 genes
# of Chromosomes/Plasmids
10
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| t3ss structural protein sepq | NCTC6267_00929 | Not Available | Negative | 769728 - 770615 | 33752.7 |
| t3ss component | NCTC6267_00930 | Not Available | Negative | 770602 - 771024 | 16721.3 |
| t3ss component | NCTC6267_00931 | Not Available | Negative | 771017 - 771397 | 15075.4 |
| t3ss translocator escn | NCTC6267_00932 | Not Available | Negative | 771397 - 772737 | 48709.2 |
| t3ss structural protein escv | NCTC6267_00933 | Not Available | Negative | 772721 - 773137 | 15721.2 |
| t3ss structural protein escv | NCTC6267_00934 | Not Available | Negative | 773082 - 774749 | 61536.3 |
| t3ss regulator mpc | NCTC6267_00935 | Not Available | Negative | 774746 - 775099 | 13880.7 |
| sepz | NCTC6267_00936 | Not Available | Positive | 775271 - 775546 | 8616.43 |
| t3ss component | NCTC6267_00937 | Not Available | Positive | 775614 - 775973 | 12697.3 |
| t3ss structural protein escj | NCTC6267_00938 | Not Available | Positive | 776017 - 776310 | 10739.9 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

