Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain NCTC6267 genome assembly, contig:
Gene Summary
Adenine Count
1265935 bp
Thymine Count
1264576 bp
Guanine Count
1350546 bp
Cytosine Count
1346301 bp
Genome Length
5227358 bp
Protein-coding Genes
5997 genes
Non-Coding Genes
355 genes
# of Chromosomes/Plasmids
10
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbrial protein hofp | NCTC6267_00443 | Not Available | Positive | 369954 - 370367 | 15552.5 |
| outer membrane porin hofq | NCTC6267_00444 | Not Available | Positive | 370469 - 371107 | 23249.9 |
| outer membrane porin hofq | NCTC6267_00445 | Not Available | Positive | 371184 - 371519 | 12227.8 |
| shikimate kinase i | NCTC6267_00446 | Not Available | Positive | 371924 - 372445 | 19489.1 |
| 3-dehydroquinate synthase | NCTC6267_00447 | Not Available | Positive | 372503 - 373591 | 38983.5 |
| damx protein | NCTC6267_00448 | Not Available | Positive | 373688 - 374974 | 45927.1 |
| dna adenine methylase | NCTC6267_00449 | Not Available | Positive | 375114 - 375614 | 19544.2 |
| dna adenine methylase | NCTC6267_00450 | Not Available | Positive | 375586 - 375930 | 12763.2 |
| ribulose-phosphate 3-epimerase | NCTC6267_00451 | Not Available | Positive | 375948 - 376625 | 24611.8 |
| phosphoglycolate phosphatase | NCTC6267_00452 | Not Available | Positive | 376618 - 377376 | 27400.8 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

