Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain NCTC6267 genome assembly, contig:
Gene Summary
Adenine Count
1265935 bp
Thymine Count
1264576 bp
Guanine Count
1350546 bp
Cytosine Count
1346301 bp
Genome Length
5227358 bp
Protein-coding Genes
5997 genes
Non-Coding Genes
355 genes
# of Chromosomes/Plasmids
10
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | NCTC6267_01491 | Not Available | Positive | 1233341 - 1233568 | 8624.59 |
| Hypothetical protein | NCTC6267_01492 | Not Available | Negative | 1233722 - 1233997 | 10064.4 |
| Phage portal protein | NCTC6267_01493 | Not Available | Negative | 1234051 - 1234725 | 25027.8 |
| Phage portal protein | NCTC6267_01494 | Not Available | Negative | 1234676 - 1235071 | 14684.6 |
| Putative terminase atpase subunit | NCTC6267_01495 | Not Available | Negative | 1235068 - 1235694 | 23776.2 |
| Putative terminase atpase subunit | NCTC6267_01496 | Not Available | Negative | 1235675 - 1236853 | 45431.7 |
| Gpo family capsid scaffolding protein | NCTC6267_01497 | Not Available | Positive | 1236997 - 1237815 | 30307.9 |
| Major capsid protein, p2 family | NCTC6267_01498 | Not Available | Positive | 1237850 - 1238119 | 10104.9 |
| Major capsid protein, p2 family | NCTC6267_01499 | Not Available | Positive | 1238097 - 1238879 | 28870.1 |
| Putative terminase endonuclease subunit | NCTC6267_01500 | Not Available | Positive | 1238890 - 1239588 | 26209.0 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

