Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain NCTC6267 genome assembly, contig:
Gene Summary
Adenine Count
1265935 bp
Thymine Count
1264576 bp
Guanine Count
1350546 bp
Cytosine Count
1346301 bp
Genome Length
5227358 bp
Protein-coding Genes
5997 genes
Non-Coding Genes
355 genes
# of Chromosomes/Plasmids
10
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| t3ss structural protein escr | NCTC6267_00949 | Not Available | Negative | 783028 - 783300 | 9801.83 |
| t3ss component | NCTC6267_00950 | Not Available | Negative | 783303 - 783965 | 25848.4 |
| t3ss component | NCTC6267_00951 | Not Available | Negative | 783952 - 784551 | 23354.0 |
| t3ss component | NCTC6267_00952 | Not Available | Negative | 784548 - 784856 | 12025.7 |
| t3ss component | NCTC6267_00953 | Not Available | Negative | 784840 - 785091 | 9628.64 |
| ler transcriptional regulator | NCTC6267_00954 | Not Available | Negative | 785103 - 785489 | 14945.5 |
| tir, translocated intimin receptor | NCTC6267_00955 | Not Available | Positive | 786238 - 787872 | 56542.1 |
| t3ss chaperone cest | NCTC6267_00956 | Not Available | Positive | 787908 - 788378 | 17705.9 |
| Hypothetical protein | NCTC6267_01479 | Not Available | Positive | 1223201 - 1224271 | 38851.2 |
| bifunctional chorismate mutase/prephenate dehydrogenase | NCTC6267_01480 | Not Available | Positive | 1224282 - 1225403 | 41887.6 |
Pathways
1368 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

