Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain NCTC6267 genome assembly, contig:
Gene Summary
Adenine Count
1265935 bp
Thymine Count
1264576 bp
Guanine Count
1350546 bp
Cytosine Count
1346301 bp
Genome Length
5227358 bp
Protein-coding Genes
5997 genes
Non-Coding Genes
355 genes
# of Chromosomes/Plasmids
10
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Duf2724 domain-containing protein | NCTC6267_04098 | Not Available | Negative | 3307369 - 3307569 | 7547.46 |
| Regulatory cii family protein | NCTC6267_04099 | Not Available | Negative | 3307577 - 3308086 | 18368.1 |
| Regulator | NCTC6267_04100 | Not Available | Negative | 3308119 - 3308340 | 8186.03 |
| Repressor protein ci | NCTC6267_04101 | Not Available | Positive | 3308436 - 3309032 | 21776.1 |
| Gp19 | NCTC6267_04102 | Not Available | Positive | 3309053 - 3310750 | 64280.1 |
| Tyrosine-type recombinase/integrase | NCTC6267_04103 | Not Available | Positive | 3310833 - 3311639 | 30819.3 |
| Attr | Not Available | Not Available | Positive | 3311961 - 3311981 | Not Available |
| Attl | Not Available | Not Available | Positive | 5169538 - 5169550 | Not Available |
| Dna invertase, resolvase, site-specific recombinase pin | NCTC6267_06364 | Not Available | Positive | 5169667 - 5169966 | 11145.5 |
| uncharacterised protein | NCTC6267_06365 | Not Available | Positive | 5170426 - 5170632 | 7548.35 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

