Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain NCTC6267 genome assembly, contig:
Gene Summary
Adenine Count
1265935 bp
Thymine Count
1264576 bp
Guanine Count
1350546 bp
Cytosine Count
1346301 bp
Genome Length
5227358 bp
Protein-coding Genes
5997 genes
Non-Coding Genes
355 genes
# of Chromosomes/Plasmids
10
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tail protein | NCTC6267_04078 | Not Available | Negative | 3293912 - 3294115 | 7523.85 |
| Head completion/stabilization protein | NCTC6267_04079 | Not Available | Negative | 3294115 - 3294579 | 17723.9 |
| Terminase endonuclease subunit | NCTC6267_04080 | Not Available | Negative | 3294673 - 3295323 | 23803.6 |
| Major capsid protein, p2 family | NCTC6267_04081 | Not Available | Negative | 3295327 - 3295752 | 16043.7 |
| Capsid protein | NCTC6267_04082 | Not Available | Negative | 3295778 - 3296392 | 22904.2 |
| Capsid scaffolding protein | NCTC6267_04083 | Not Available | Negative | 3296409 - 3297242 | 30453.7 |
| Terminase atpase subunit | NCTC6267_04084 | Not Available | Positive | 3297385 - 3299031 | 63088.1 |
| Terminase-like family protein | NCTC6267_04085 | Not Available | Positive | 3299152 - 3299724 | 21047.0 |
| uncharacterised protein | NCTC6267_04086 | Not Available | Positive | 3299708 - 3299878 | 6205.2 |
| Portal protein | NCTC6267_04087 | Not Available | Positive | 3299875 - 3300912 | 39173.7 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

