Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain NCTC6267 genome assembly, contig:
Gene Summary
Adenine Count
1265935 bp
Thymine Count
1264576 bp
Guanine Count
1350546 bp
Cytosine Count
1346301 bp
Genome Length
5227358 bp
Protein-coding Genes
5997 genes
Non-Coding Genes
355 genes
# of Chromosomes/Plasmids
10
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | NCTC6267_03637 | Not Available | Negative | 2939674 - 2940012 | 12271.7 |
| Head outer capsid protein | NCTC6267_03638 | Not Available | Negative | 2940213 - 2941520 | 45741.8 |
| Putative small terminase subunit | NCTC6267_03639 | Not Available | Negative | 2941575 - 2942327 | 27556.5 |
| Lysin | NCTC6267_03640 | Not Available | Negative | 2942752 - 2943024 | 9858.04 |
| Transposase insc | NCTC6267_03641 | Not Available | Positive | 2943102 - 2943467 | 13609.6 |
| Insertion element is2 transposase insd | NCTC6267_03642 | Not Available | Positive | 2943515 - 2944330 | 31139.9 |
| t3ss translocator protein espa | NCTC6267_03643 | Not Available | Positive | 2944743 - 2945012 | 9811.67 |
| t3ss translocator protein espa | NCTC6267_03644 | Not Available | Positive | 2944966 - 2945433 | 17060.1 |
| Hypothetical protein | NCTC6267_03645 | Not Available | Positive | 2946172 - 2946621 | 15762.3 |
| uncharacterised protein | NCTC6267_03646 | Not Available | Positive | 2946593 - 2946766 | 6138.44 |
Pathways
1235 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

