Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain NCTC6267 genome assembly, contig:
Gene Summary
Adenine Count
1265935 bp
Thymine Count
1264576 bp
Guanine Count
1350546 bp
Cytosine Count
1346301 bp
Genome Length
5227358 bp
Protein-coding Genes
5997 genes
Non-Coding Genes
355 genes
# of Chromosomes/Plasmids
10
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | NCTC6267_03087 | Not Available | Positive | 2508973 - 2509287 | 11582.9 |
| Hypothetical protein | NCTC6267_03088 | Not Available | Positive | 2509692 - 2509961 | 10077.1 |
| Tail fiber assembly protein | NCTC6267_03089 | Not Available | Negative | 2509977 - 2510231 | 9223.0 |
| Tail fiber assembly protein | NCTC6267_03090 | Not Available | Negative | 2510418 - 2510555 | 4963.8 |
| Tail protein | NCTC6267_03091 | Not Available | Negative | 2510922 - 2511725 | 28150.1 |
| Reca-dependent nuclease | NCTC6267_03092 | Not Available | Negative | 2511865 - 2512434 | 21915.5 |
| Terminase large subunit | NCTC6267_03100 | Not Available | Positive | 2516383 - 2516898 | 19476.5 |
| Terminase large subunit | NCTC6267_03101 | Not Available | Positive | 2516846 - 2517307 | 17079.2 |
| Phage terminase large subunit | NCTC6267_03102 | Not Available | Positive | 2517270 - 2517719 | 17277.6 |
| Portal protein | NCTC6267_03103 | Not Available | Positive | 2518047 - 2519069 | 37463.0 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

