Citrobacter freundii

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Citrobacter

Description

Citrobacter freundii is a Gram-negative, rod-shaped bacterium characterized by the presence of true flagella and a facultative anaerobic metabolism. This microbe is nonsporulating, which indicates its inability to form spores as a survival mechanism under adverse conditions. C. freundii is typically found in diverse habitats, including hospital sewage, the intestinal tract of various hosts, general sewage, soil, and surface waters. The genomic architecture of C. freundii is notable, comprising ten replicons, which reflects its complex genetic organization and potential adaptability to various environments. The strain is represented by multiple genome accessions, underscoring the existence of various genomic sequences associated with this species. C. freundii's environmental versatility allows it to thrive in different niches, providing insight into its potential role in nutrient cycling and microbial community dynamics. Its presence in both clinical and environmental settings highlights its ecological significance and the need for further research to understand its interactions within microbial ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusCitrobacter
SpeciesCitrobacter freundii
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Citrobacter freundii
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitathospital sewage; intestinal tract; sewage; soil; surface waters
Biotic relationshipNot Available
Host(s)Homo sapiens, Metazoa, Oryctolagus cuniculus
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Gene Summary

Adenine Count

1265935 bp

Thymine Count

1264576 bp

Guanine Count

1350546 bp

Cytosine Count

1346301 bp

Genome Length

5227358 bp

Protein-coding Genes

5997 genes

Non-Coding Genes

355 genes

# of Chromosomes/Plasmids

10

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
agmatinaseNCTC6267_01021Not AvailablePositive842688 - 84360833547.9
peptidaseNCTC6267_01022Not AvailableNegative843720 - 84447826662.7
transketolaseNCTC6267_01023Not AvailablePositive844642 - 84675076433.8
putative mannitol phosphotransferase subunit eiiaNCTC6267_01024Not AvailablePositive847067 - 84751015914.9
mannitol-specific pts system eiicba componentNCTC6267_01025Not AvailablePositive847538 - 84891748874.0
sorbitol dehydrogenaseNCTC6267_01026Not AvailablePositive848942 - 84953221550.9
zinc-binding dehydrogenaseNCTC6267_01027Not AvailablePositive849483 - 85022026002.2
fructose-1,6-bisphosphatase ii-like proteinNCTC6267_01028Not AvailablePositive850217 - 85118834339.9
putative dna-binding transcriptional regulatorNCTC6267_01029Not AvailablePositive851204 - 85171319181.9
putative fructose transport system kinaseNCTC6267_01030Not AvailablePositive851710 - 85242026890.1

Displaying genes 1321 – 1330 of 39632 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Infections in animalsCausesPMC6885840
Infections of the urinary and respiratory tracts in humansCausesPMC6885840
Respiratory tract and wound infections in horsesCausesPMC6885840
Respiratory tract infections in dogsCausesPMC6885840
Pleuritis and urinary tract infections in catsCausesPMC6885840
Bacterial infectionsCausesPMC7578172
Opportunistic infectionsCausesPMC12838003

Displaying health effects 1 – 7 of 7 in total