Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain NCTC6267 genome assembly, contig:
Gene Summary
Adenine Count
1265935 bp
Thymine Count
1264576 bp
Guanine Count
1350546 bp
Cytosine Count
1346301 bp
Genome Length
5227358 bp
Protein-coding Genes
5997 genes
Non-Coding Genes
355 genes
# of Chromosomes/Plasmids
10
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Portal protein | NCTC6267_02274 | Not Available | Negative | 1847097 - 1848134 | 39283.6 |
| Terminase | NCTC6267_02275 | Not Available | Negative | 1848134 - 1849903 | 66936.3 |
| Capsid scaffolding protein | NCTC6267_02276 | Not Available | Positive | 1850068 - 1850895 | 30090.6 |
| P2 family major capsid protein | NCTC6267_02277 | Not Available | Positive | 1850964 - 1851572 | 22921.3 |
| Capsid protein | NCTC6267_02278 | Not Available | Positive | 1851607 - 1852125 | 19153.7 |
| Terminase | NCTC6267_02279 | Not Available | Positive | 1852408 - 1852890 | 17264.0 |
| Head completion-stabilization protein | NCTC6267_02280 | Not Available | Positive | 1852988 - 1853488 | 19095.9 |
| Tail protein | NCTC6267_02281 | Not Available | Positive | 1853488 - 1853691 | 7061.38 |
| Holin | NCTC6267_02282 | Not Available | Positive | 1853682 - 1853903 | 8375.43 |
| Prophage lysozyme | NCTC6267_02283 | Not Available | Positive | 1853887 - 1854396 | 18672.7 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

