Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium fabrum |
| Strain | strain 12D13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium fabrum strain 12D13
Gene Summary
Adenine Count
25510 bp
Thymine Count
24972 bp
Guanine Count
34733 bp
Cytosine Count
34375 bp
Genome Length
119590 bp
Protein-coding Genes
121 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-directed rna polymerase subunit omega | At12D13_RS25950 | Not Available | Positive | 71835 - 73016 | 41990.4 |
| fic family protein | At12D13_RS25960 | Not Available | Positive | 73556 - 74698 | 42736.6 |
| hypothetical protein | At12D13_RS25965 | Not Available | Positive | 74860 - 75678 | 31267.8 |
| hypothetical protein | At12D13_RS27405 | Not Available | Positive | 75639 - 76214 | 21517.9 |
| autotransporter domain-containing protein | At12D13_RS25975 | Not Available | Negative | 76204 - 81123 | 163281.0 |
| outer membrane protein | At12D13_RS25980 | Not Available | Negative | 81443 - 82072 | 22336.7 |
| helix-turn-helix domain-containing protein | At12D13_RS25985 | Not Available | Negative | 82504 - 83547 | 38805.8 |
| sensor histidine kinase | At12D13_RS25990 | Not Available | Negative | 83596 - 84648 | 38359.2 |
| atpase domain-containing protein | At12D13_RS25995 | Not Available | Negative | 84645 - 86087 | 52333.0 |
| sensor histidine kinase | At12D13_RS26000 | Not Available | Positive | 86328 - 87743 | 51961.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

