Agrobacterium fabrum

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Agrobacterium

Description

Agrobacterium fabrum is a Gram-negative, rod-shaped bacterium that thrives optimally at a temperature of 25.0°C and is classified as an aerobe, requiring oxygen for its metabolic processes. This microbe is known to inhabit a variety of environments, which suggests a versatile ecological adaptability. As a member of the Agrobacterium genus, A. fabrum is particularly noted for its role in plant-associated interactions, where it can transfer genetic material to host plants, a mechanism facilitated by its unique plasmids. The ability to thrive in diverse habitats may contribute to its ecological significance in both natural and agricultural settings, particularly in relation to plant development and transformation processes. The ecological versatility of A. fabrum highlights its potential role in symbiotic relationships within various ecosystems, including soil and plant environments, where it may influence plant health and growth. Understanding the adaptive strategies of A. fabrum in different habitats can provide insights into its interactions with plant hosts and its potential applications in biotechnology and sustainable agriculture.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAgrobacterium
SpeciesAgrobacterium fabrum
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Agrobacterium fabrum
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agrobacterium fabrum


Gene Summary

Adenine Count

1136827 bp

Thymine Count

1144814 bp

Guanine Count

1663783 bp

Cytosine Count

1637536 bp

Genome Length

5582960 bp

Protein-coding Genes

5122 genes

Non-Coding Genes

119 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Putative rnase h1SAMN05428983_0536Not Available+546698 - 54725219840.3
hypothetical proteinSAMN05428983_0537Not Available+547249 - 54833440713.6
Nusg-like transcription anti-terminatorSAMN05428983_0538Not Available+548331 - 54914030842.6
Hypothetical proteinSAMN05428983_0539Not Available-549303 - 5494736322.59
AttlNot AvailableNot Available+549319 - 549331Not Available
Hnh endonucleaseSAMN05428983_0540Not Available-549582 - 55012720660.8
Putative terminase small subunitSAMN05428983_0541Not Available+550577 - 55105017682.7
Putative terminase large subunitSAMN05428983_0542Not Available+551031 - 55252755863.0
Putative portal proteinSAMN05428983_0543Not Available+552527 - 55448873129.2
hypothetical proteinSAMN05428983_0544Not Available+554576 - 55541830464.2

Displaying genes 1 – 10 of 5241 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites