Agrobacterium fabrum str. 1D132

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Agrobacterium

Description

Agrobacterium fabrum str. 1D132 is a Gram-negative, rod-shaped bacterium that thrives optimally at a temperature of 25.0°C and exhibits aerobic metabolism. This microbe is known to inhabit a variety of environments, suggesting a versatile ecological niche. Its classification as an aerobe indicates that it requires oxygen for its growth and energy production, which is typical for many bacteria found in diverse habitats. The rod shape of A. fabrum str. 1D132 may contribute to its motility and ability to colonize different substrates, potentially facilitating interactions with plant hosts or other microorganisms in its environment. The ability to adapt to multiple habitats indicates a level of ecological flexibility, which may be crucial for survival in fluctuating environmental conditions. The traits of A. fabrum str. 1D132 highlight its potential role in various ecological interactions, possibly including nutrient cycling and the promotion of plant health. Its aerobic nature and optimal growth conditions may also suggest a competitive advantage in environments rich in organic matter, where oxygen is accessible. Overall, the characteristics of A. fabrum str. 1D132 underscore the complexity of microbial life and its adaptive strategies in diverse ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAgrobacterium
SpeciesAgrobacterium fabrum
Strain1D132

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Agrobacterium fabrum str. 1D132
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agrobacterium fabrum str. 1D132


Gene Summary

Adenine Count

409533 bp

Thymine Count

410307 bp

Guanine Count

595904 bp

Cytosine Count

598154 bp

Genome Length

2013898 bp

Protein-coding Genes

1760 genes

Non-Coding Genes

21 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
hypothetical proteinAt1D132_RS14775Not Available-1074 - 178726321.6
hypothetical proteinAt1D132_RS14780Not Available-1876 - 262928475.7
hypothetical proteinAt1D132_RS14785Not Available+2698 - 311715688.6
o-antigen ligase family proteinAt1D132_RS14795Not Available-3524 - 473244633.9
hypothetical proteinAt1D132_RS14800Not Available-4962 - 52109949.93
acyltransferase family proteinAt1D132_RS14810Not Available+5641 - 670839607.7
srpbcc family proteinAt1D132_RS14815Not Available-6735 - 765834087.3
arsr/smtb family transcription factorAt1D132_RS14820Not Available-7655 - 799612607.4
type vi immunity family proteinAt1D132_RS14825Not Available-8224 - 891325645.7
type ii toxin-antitoxin system vapc family toxinAt1D132_RS14830Not Available-9071 - 947514940.8

Displaying genes 1 – 10 of 5211 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites