Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium fabrum |
| Strain | strain 12D13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium fabrum strain 12D13
Gene Summary
Adenine Count
25510 bp
Thymine Count
24972 bp
Guanine Count
34733 bp
Cytosine Count
34375 bp
Genome Length
119590 bp
Protein-coding Genes
121 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | At12D13_RS25895 | Not Available | Positive | 65324 - 65512 | 6528.56 |
| duf3175 domain-containing protein | At12D13_RS25900 | Not Available | Positive | 65534 - 65824 | 11011.3 |
| hypothetical protein | At12D13_RS27400 | Not Available | Positive | 66689 - 67060 | 14138.6 |
| hypothetical protein | At12D13_RS25910 | Not Available | Positive | 67117 - 67521 | 14906.1 |
| gmc family oxidoreductase | At12D13_RS25915 | Not Available | Positive | 67552 - 68031 | 17830.3 |
| sdr family oxidoreductase | At12D13_RS25920 | Not Available | Positive | 68260 - 69117 | 30420.5 |
| transcriptional regulator | At12D13_RS25925 | Not Available | Negative | 69823 - 70185 | 13106.0 |
| hypothetical protein | At12D13_RS27270 | Not Available | Positive | 70279 - 70818 | 19981.7 |
| type iv secretion system protein virb1 | At12D13_RS25935 | Not Available | Positive | 70821 - 71510 | 24316.7 |
| dna-directed rna polymerase subunit omega | At12D13_RS25940 | Not Available | Positive | 71507 - 71602 | 3317.23 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

