Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium fabrum |
| Strain | strain 12D13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium fabrum strain 12D13
Gene Summary
Adenine Count
25510 bp
Thymine Count
24972 bp
Guanine Count
34733 bp
Cytosine Count
34375 bp
Genome Length
119590 bp
Protein-coding Genes
121 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | At12D13_RS25845 | Not Available | Negative | 55834 - 56928 | 40007.2 |
| glycosyltransferase | At12D13_RS25850 | Not Available | Negative | 56925 - 58055 | 42335.1 |
| glycosyltransferase family 4 protein | At12D13_RS25855 | Not Available | Negative | 58059 - 59174 | 40682.0 |
| nad-dependent epimerase/dehydratase family protein | At12D13_RS25860 | Not Available | Negative | 59171 - 61204 | 75815.7 |
| nad-dependent epimerase/dehydratase family protein | At12D13_RS25865 | Not Available | Negative | 61204 - 62310 | 39990.8 |
| mdr/zinc-dependent alcohol dehydrogenase-like family protein | At12D13_RS25870 | Not Available | Positive | 62541 - 63527 | 36114.3 |
| crp/fnr family transcriptional regulator | At12D13_RS25875 | Not Available | Positive | 63714 - 64487 | 28742.1 |
| duf6894 family protein | At12D13_RS25880 | Not Available | Negative | 64443 - 64682 | 8865.5 |
| hypothetical protein | At12D13_RS25885 | Not Available | Negative | 64720 - 64908 | 7239.73 |
| hypothetical protein | At12D13_RS25890 | Not Available | Positive | 65078 - 65281 | 7497.55 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

