Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium fabrum |
| Strain | strain 12D13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium fabrum strain 12D13
Gene Summary
Adenine Count
25510 bp
Thymine Count
24972 bp
Guanine Count
34733 bp
Cytosine Count
34375 bp
Genome Length
119590 bp
Protein-coding Genes
121 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| c-type cytochrome | At12D13_RS25690 | Not Available | Positive | 33307 - 33912 | 21806.1 |
| cytochrome c oxidase subunit ii | At12D13_RS25695 | Not Available | Positive | 33909 - 34901 | 36294.9 |
| cytochrome c oxidase subunit i | At12D13_RS25700 | Not Available | Positive | 34898 - 36811 | 70649.6 |
| cytochrome c oxidase subunit 3 | At12D13_RS25705 | Not Available | Positive | 36808 - 37410 | 22451.9 |
| hypothetical protein | At12D13_RS25710 | Not Available | Positive | 37407 - 37718 | 10484.2 |
| cytochrome c oxidase assembly protein | At12D13_RS25715 | Not Available | Positive | 37706 - 38599 | 32757.8 |
| c-type cytochrome | At12D13_RS25720 | Not Available | Positive | 38574 - 38987 | 14621.7 |
| c-type cytochrome | At12D13_RS25725 | Not Available | Negative | 38991 - 39797 | 28603.1 |
| hypothetical protein | At12D13_RS25730 | Not Available | Positive | 40149 - 40346 | 6947.26 |
| hypothetical protein | At12D13_RS25735 | Not Available | Negative | 40371 - 40601 | 8414.74 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

