Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium fabrum |
| Strain | strain 12D13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium fabrum strain 12D13
Gene Summary
Adenine Count
25510 bp
Thymine Count
24972 bp
Guanine Count
34733 bp
Cytosine Count
34375 bp
Genome Length
119590 bp
Protein-coding Genes
121 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator | At12D13_RS25640 | Not Available | Positive | 22210 - 22569 | 13585.4 |
| hypothetical protein | At12D13_RS25645 | Not Available | Negative | 22623 - 23066 | 16609.2 |
| four-helix bundle copper-binding protein | At12D13_RS27265 | Not Available | Positive | 23281 - 23613 | 12179.8 |
| c-type cytochrome | At12D13_RS25655 | Not Available | Negative | 23642 - 24697 | 38442.4 |
| cytochrome c oxidase assembly protein | At12D13_RS25660 | Not Available | Negative | 24691 - 25320 | 22027.8 |
| hypothetical protein | At12D13_RS25665 | Not Available | Negative | 25317 - 25691 | 13654.1 |
| cytochrome c oxidase subunit i | At12D13_RS25670 | Not Available | Negative | 25697 - 28216 | 93216.1 |
| c-type cytochrome | At12D13_RS25675 | Not Available | Negative | 28213 - 29073 | 31209.1 |
| zinc-dependent alcohol dehydrogenase | At12D13_RS25680 | Not Available | Negative | 29519 - 30688 | 42228.8 |
| fdhf/ydep family oxidoreductase | At12D13_RS25685 | Not Available | Positive | 30886 - 33288 | 87403.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

