Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium fabrum |
| Strain | strain 12D13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium fabrum strain 12D13
Gene Summary
Adenine Count
25510 bp
Thymine Count
24972 bp
Guanine Count
34733 bp
Cytosine Count
34375 bp
Genome Length
119590 bp
Protein-coding Genes
121 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tigr03885 family fmn-dependent llm class oxidoreductase | At12D13_RS25585 | Not Available | Negative | 11615 - 12595 | 36293.4 |
| flavodoxin family protein | At12D13_RS25590 | Not Available | Positive | 13158 - 13775 | 22093.4 |
| dna-directed rna polymerase subunit omega | At12D13_RS27260 | Not Available | Positive | 14167 - 14319 | 5393.99 |
| general stress protein | At12D13_RS25605 | Not Available | Positive | 14348 - 14950 | 20526.2 |
| duf6766 family protein | At12D13_RS25610 | Not Available | Positive | 15411 - 16070 | 24448.2 |
| thiamine pyrophosphate-dependent enzyme | At12D13_RS25615 | Not Available | Negative | 16118 - 17878 | 64009.3 |
| hypothetical protein | At12D13_RS25620 | Not Available | Negative | 18024 - 18236 | 7623.76 |
| hypothetical protein | At12D13_RS25625 | Not Available | Positive | 18423 - 18638 | 7649.79 |
| hypothetical protein | At12D13_RS25630 | Not Available | Positive | 18662 - 18907 | 9326.63 |
| cher family methyltransferase | At12D13_RS25635 | Not Available | Positive | 19114 - 22203 | 114382.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

