Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium fabrum |
| Strain | strain 1D132 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium fabrum strain 1D132 chromosome linear, complete
Gene Summary
Adenine Count
409533 bp
Thymine Count
410307 bp
Guanine Count
595904 bp
Cytosine Count
598154 bp
Genome Length
2013898 bp
Protein-coding Genes
1760 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| secondary thiamine-phosphate synthase enzyme yjbq | At1D132_RS09695 | Not Available | Negative | 1867469 - 1867891 | 15665.9 |
| hwe histidine kinase domain-containing protein | At1D132_RS09700 | Not Available | Positive | 1868135 - 1870687 | 93856.4 |
| duf930 domain-containing protein | At1D132_RS09705 | Not Available | Negative | 1870839 - 1871759 | 32806.6 |
| rna polymerase sigma factor rpod | At1D132_RS09710 | Not Available | Negative | 1871954 - 1874008 | 77403.9 |
| dna primase | At1D132_RS09715 | Not Available | Negative | 1874401 - 1876386 | 73687.4 |
| gatb/yqey domain-containing protein | At1D132_RS09720 | Not Available | Negative | 1876774 - 1877226 | 16709.2 |
| glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | At1D132_RS09725 | Not Available | Positive | 1877562 - 1878767 | 42942.1 |
| mate family efflux transporter | At1D132_RS09730 | Not Available | Negative | 1878804 - 1880201 | 49728.6 |
| methyl-accepting chemotaxis protein | At1D132_RS09735 | Not Available | Positive | 1880532 - 1882622 | 74103.6 |
| duf2938 domain-containing protein | At1D132_RS09740 | Not Available | Positive | 1882916 - 1883395 | 17510.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

