Alistipes putredinis

anaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Rikenellaceae

Genus

Alistipes

Description

Alistipes putredinis is a Gram-negative, anaerobic bacterium that is part of the human microbiome, specifically associated with Homo sapiens. This organism possesses true flagella, which facilitates its motility in anaerobic environments. A. putredinis has a single replicon, indicating a streamlined genomic structure. Research indicates that A. putredinis may have health implications, particularly concerning colorectal cancer metastasis. This association underscores the potential role of gut microbiota in influencing cancer progression and highlights the importance of understanding microbial communities within the human gut. Given its anaerobic nature and flagellar motility, A. putredinis is well-adapted to the low-oxygen environments of the intestines, where it may contribute to various metabolic processes. The presence of this bacterium in the human gastrointestinal tract suggests it may play a role in gut health and disease, although the exact mechanisms by which it influences colorectal cancer are still under investigation. Overall, the characteristics of A. putredinis emphasize its significance within the human microbiome and its potential impact on health, particularly concerning gastrointestinal diseases. Further research is needed to elucidate its functions and interactions within the complex ecosystem of the gut. The accession number for A. putredinis is MNQH00000000.1, which provides a reference for genomic studies related to this bacterium.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyRikenellaceae
GenusAlistipes
SpeciesAlistipes putredinis
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Alistipes putredinis


Gene Summary

Adenine Count

534499 bp

Thymine Count

548892 bp

Guanine Count

653819 bp

Cytosine Count

633207 bp

Genome Length

2372256 bp

Protein-coding Genes

2038 genes

Non-Coding Genes

47 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nad-binding oxidoreductaseBHV66_00005Not AvailablePositive1 - 78628739.7
glutamate synthase (nadph), homotetramericBHV66_00010Not AvailablePositive890 - 228450004.2
hypothetical proteinBHV66_00015Not AvailablePositive2298 - 286420227.2
adp-heptose--lps heptosyltransferaseBHV66_00020Not AvailableNegative3047 - 407838507.2
hypothetical proteinBHV66_00025Not AvailableNegative4062 - 466723657.3
muramidaseBHV66_00030Not AvailablePositive4808 - 580637556.0
Ncrna_class:rnase_p_rnaNot AvailableNot AvailablePositive5352 - 5706Not Available
hypothetical proteinBHV66_00035Not AvailablePositive5825 - 651126791.8
dipeptidyl aminopeptidaseBHV66_00040Not AvailablePositive6554 - 868380638.5
cysteine methyltransferaseBHV66_00045Not AvailablePositive8697 - 916717237.0

Displaying genes 1 – 10 of 2085 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

89 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm00055001-octadecanoyl-sn-glycero-3-phosphateC21H41O7PChemical structure of 1-octadecanoyl-sn-glycero-3-phosphateNot available
Average436.5198Da
Monoisotopic436.2589902Da
BASm0012554N-acetyl-beta-D-glucosaminyl-(1->4)-1,6-anhydro-N-acetyl-beta-D-muramoyl-L-alanyl-gamma-D-glutamyl-meso-diaminoheptanedioate-D-alanineC37H57N7O20Not availableNot available
Average919.893Da
Monoisotopic919.366934423Da
BASm0012579N-acetyl-D-glutamateC7H9NO5Not availableNot available
Average187.152Da
Monoisotopic187.049169554Da
BASm0014032Acetic acidC2H4O2Chemical structure of Acetic acid64-19-7
Average60.052Da
Monoisotopic60.021129372Da
BASm0014033AmmoniaH3NChemical structure of Ammonia7664-41-7
Average17.0305Da
Monoisotopic17.026549101Da
BASm0014041Oleic acidC18H34O2Chemical structure of Oleic acid112-80-1
Average282.4614Da
Monoisotopic282.255880332Da
BASm0014058Myristic acidC14H28O2Chemical structure of Myristic acid544-63-8
Average228.3709Da
Monoisotopic228.20893014Da
BASm0014153gamma-Glutamylglutamic acidC10H16N2O7Chemical structure of gamma-Glutamylglutamic acidNULL
Average276.2432Da
Monoisotopic276.095750876Da
BASm0014182Vaccenic acidC18H34O2Chemical structure of Vaccenic acidNULL
Average282.468Da
Monoisotopic282.255880335Da

Displaying 1–10 of 89 metabolites

Health Effects

Health ConditionRelationReference
Colorectal cancer metastasisCausesPMC11786048

Displaying health effects 1 – 1 of 1 in total