Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
702205 bp
Thymine Count
710038 bp
Guanine Count
972140 bp
Cytosine Count
963508 bp
Genome Length
3372095 bp
Protein-coding Genes
2773 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| undecaprenyl-diphosphatase | ERS852447_00001 | Not Available | Positive | 106 - 897 | 28159.3 |
| trna pseudouridine synthase b | ERS852447_00002 | Not Available | Positive | 897 - 1613 | 26612.3 |
| s-adenosylmethionine:trna ribosyltransferase-isomerase | ERS852447_00003 | Not Available | Positive | 1679 - 2728 | 39991.0 |
| glycogen synthase 1 | ERS852447_00004 | Not Available | Positive | 2782 - 3588 | 30375.2 |
| uncharacterised protein | ERS852447_00005 | Not Available | Positive | 3599 - 5224 | 60692.3 |
| dna topoisomerase 1 | ERS852447_00006 | Not Available | Positive | 5302 - 7599 | 85837.4 |
| peptidase c1-like family | ERS852447_00007 | Not Available | Positive | 7628 - 8836 | 45270.7 |
| secreted effector protein pipb | ERS852447_00008 | Not Available | Negative | 9189 - 9830 | 23617.2 |
| outer membrane protein/protective antigen oma87 | ERS852447_00009 | Not Available | Positive | 10010 - 11425 | 53370.0 |
| uncharacterised protein | ERS852447_00010 | Not Available | Negative | 11522 - 12088 | 20543.6 |
Health Effects
No health effects information available for this bacterium.
