Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes indistinctus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | fecal sample |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
689370 bp
Thymine Count
650676 bp
Guanine Count
777761 bp
Cytosine Count
815973 bp
Genome Length
2934025 bp
Protein-coding Genes
2369 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s ribosomal rna | Not Available | Not Available | Positive | 3 - 1541 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 16 - 2884 | Not Available |
| glucose-1-phosphate thymidylyltransferase | DWW78_00005 | Not Available | Negative | 1 - 602 | 21823.3 |
| upxy family transcription antiterminator | DWW78_00010 | Not Available | Negative | 863 - 1384 | 20330.8 |
| efflux rnd transporter periplasmic adaptor subunit | DWW78_00015 | Not Available | Positive | 1723 - 3027 | 47431.2 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 2979 - 3090 | Not Available |
| multidrug efflux rnd transporter permease subunit | DWW78_00020 | Not Available | Positive | 3031 - 6192 | 114871.0 |
| tolc family protein | DWW78_00025 | Not Available | Positive | 6197 - 7579 | 51409.8 |
| glycerol-3-phosphate dehydrogenase/oxidase | DWW78_00030 | Not Available | Positive | 7670 - 9232 | 58148.0 |
| deor/glpr transcriptional regulator | DWW78_00035 | Not Available | Negative | 9456 - 10223 | 27772.9 |
