Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes putredinis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
534499 bp
Thymine Count
548892 bp
Guanine Count
653819 bp
Cytosine Count
633207 bp
Genome Length
2372256 bp
Protein-coding Genes
2038 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | BHV66_00850 | Not Available | Negative | 167555 - 168028 | 18128.8 |
| beta-galactosidase | BHV66_00855 | Not Available | Negative | 168162 - 169481 | 49683.9 |
| asparagine--trna ligase | BHV66_00860 | Not Available | Positive | 169600 - 170988 | 52848.2 |
| rna polymerase sigma-54 factor | BHV66_00865 | Not Available | Positive | 171133 - 172548 | 54809.4 |
| hypothetical protein | BHV66_00870 | Not Available | Positive | 172560 - 173171 | 21859.0 |
| hypothetical protein | BHV66_00875 | Not Available | Negative | 173369 - 173950 | 20686.5 |
| duf4923 domain-containing protein | BHV66_00880 | Not Available | Negative | 173990 - 174583 | 20890.1 |
| nad(+) synthase | BHV66_00885 | Not Available | Negative | 174605 - 176539 | 71627.3 |
| peptidase t | BHV66_00890 | Not Available | Negative | 176717 - 177934 | 44988.8 |
| oligopeptide transporter, opt family | BHV66_00895 | Not Available | Negative | 177954 - 179891 | 67708.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
