Alistipes putredinis DSM 17216

anaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Rikenellaceae

Genus

Alistipes

Description

Alistipes putredinis DSM 17216 is a Gram-negative bacterium notable for its anaerobic lifestyle, meaning it thrives in environments devoid of oxygen. This characteristic aligns with its ecological niche, potentially contributing to the breakdown of organic matter in anaerobic environments such as the human gut or other low-oxygen habitats. The presence of flagella in A. putredinis indicates that it has the capability for motility, which may enhance its ability to colonize niches within anaerobic ecosystems. The bacterium has a single replicon, suggesting a streamlined genomic organization which could be reflective of its adaptation to its specific ecological roles. The accession number ABFK00000000.2 provides a reference to its genomic data, which can be valuable for further research into its metabolic pathways and interactions within microbial communities. Understanding the traits of A. putredinis, particularly its anaerobic growth and motility, provides insights into its potential ecological roles, such as its involvement in nutrient cycling and interactions with other microorganisms in its environment.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyRikenellaceae
GenusAlistipes
SpeciesAlistipes putredinis
StrainDSM 17216

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Alistipes putredinis DSM 17216


Gene Summary

Adenine Count

566830 bp

Thymine Count

624780 bp

Guanine Count

708676 bp

Cytosine Count

649592 bp

Genome Length

2549878 bp

Protein-coding Genes

2704 genes

Non-Coding Genes

99 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Type ii restriction endonucleaseALIPUT_01186Not AvailableNegative1098989 - 110000539294.5
IntegraseALIPUT_01187Not AvailableNegative1100103 - 110131146990.8
hypothetical proteinALIPUT_01188Not AvailableNegative1101313 - 110173816783.4
hypothetical proteinALIPUT_01189Not AvailablePositive1101880 - 11020085401.95
IntegraseALIPUT_01190Not AvailablePositive1102024 - 110324446245.6
Phage head morphogenesis proteinALIPUT_01191Not AvailableNegative1103652 - 110474042192.9
Phage portal proteinALIPUT_01192Not AvailableNegative1104750 - 110615653603.0
Large subunit terminase terlALIPUT_01193Not AvailableNegative1106168 - 110758354676.4
Hth domain containing proteinALIPUT_01194Not AvailableNegative1107638 - 110808416594.6
Parb-like nucleaseALIPUT_01195Not AvailableNegative1108108 - 110883027901.2

Displaying genes 1 – 10 of 2803 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

494 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000950L-xyluloseC5H10O5Chemical structure of L-xylulose527-50-4
Average150.1299Da
Monoisotopic150.05282343Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da

Displaying 1–10 of 494 metabolites

Health Effects

No health effects information available for this bacterium.