Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes putredinis |
| Strain | DSM 17216 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
566830 bp
Thymine Count
624780 bp
Guanine Count
708676 bp
Cytosine Count
649592 bp
Genome Length
2549878 bp
Protein-coding Genes
2704 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome recycling factor | ALIPUT_00885 | Not Available | Negative | 812394 - 812951 | 20677.7 |
| antioxidant, ahpc/tsa family | ALIPUT_00886 | Not Available | Negative | 812965 - 813594 | 23521.4 |
| ump kinase | ALIPUT_00887 | Not Available | Negative | 813612 - 814319 | 25547.0 |
| 1-deoxy-d-xylulose-5-phosphate synthase | ALIPUT_00888 | Not Available | Positive | 814400 - 816289 | 68991.1 |
| lipocalin-like protein | ALIPUT_00889 | Not Available | Positive | 816309 - 816863 | 21112.5 |
| recombination protein recr | ALIPUT_00890 | Not Available | Negative | 816963 - 817559 | 22474.3 |
| tetratricopeptide repeat protein | ALIPUT_00891 | Not Available | Negative | 817600 - 818427 | 30758.8 |
| batd family protein | ALIPUT_00892 | Not Available | Negative | 818433 - 820283 | 68239.5 |
| hydrolyase, tartrate beta subunit/fumarate domain protein, fe-s type | ALIPUT_00893 | Not Available | Negative | 820332 - 821942 | 59456.5 |
| fructose-1,6-bisphosphate aldolase, class ii | ALIPUT_00894 | Not Available | Positive | 822086 - 823132 | 38577.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
