Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes putredinis |
| Strain | DSM 17216 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
566830 bp
Thymine Count
624780 bp
Guanine Count
708676 bp
Cytosine Count
649592 bp
Genome Length
2549878 bp
Protein-coding Genes
2704 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal protein s4 | ALIPUT_00655 | Not Available | Positive | 607490 - 608098 | 22580.4 |
| dna-directed rna polymerase, alpha subunit | ALIPUT_00656 | Not Available | Positive | 608123 - 609115 | 36840.6 |
| ribosomal protein l17 | ALIPUT_00657 | Not Available | Positive | 609121 - 609735 | 21936.8 |
| pyridoxal-phosphate dependent trpb-like enzyme | ALIPUT_00658 | Not Available | Negative | 610538 - 611899 | 50176.1 |
| hypothetical protein | ALIPUT_00659 | Not Available | Positive | 612002 - 612235 | 9225.37 |
| triose-phosphate isomerase | ALIPUT_00660 | Not Available | Negative | 612245 - 613357 | 40364.8 |
| lysine--trna ligase | ALIPUT_00661 | Not Available | Negative | 613371 - 615095 | 66032.4 |
| dna/rna non-specific endonuclease | ALIPUT_00662 | Not Available | Positive | 615502 - 617808 | 84796.1 |
| hypothetical protein | ALIPUT_00663 | Not Available | Positive | 617884 - 618018 | 4645.48 |
| transporter, major facilitator family protein | ALIPUT_00664 | Not Available | Positive | 618214 - 619410 | 42912.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
