Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes putredinis |
| Strain | DSM 17216 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
566830 bp
Thymine Count
624780 bp
Guanine Count
708676 bp
Cytosine Count
649592 bp
Genome Length
2549878 bp
Protein-coding Genes
2704 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALIPUT_00565 | Not Available | Negative | 532691 - 532885 | 7691.68 |
| diaminopimelate epimerase | ALIPUT_00566 | Not Available | Negative | 532909 - 533721 | 29360.8 |
| nitroreductase family protein | ALIPUT_00567 | Not Available | Positive | 533941 - 534687 | 28133.6 |
| outer membrane protein, omp85 family | ALIPUT_00568 | Not Available | Positive | 534696 - 537083 | 92337.1 |
| outer membrane protein | ALIPUT_00569 | Not Available | Negative | 537321 - 537833 | 19470.5 |
| outer membrane protein | ALIPUT_00570 | Not Available | Negative | 537863 - 538372 | 19308.1 |
| outer membrane protein assembly complex, yaet protein | ALIPUT_00571 | Not Available | Negative | 538445 - 541024 | 97668.9 |
| di-trans,poly-cis-decaprenylcistransferase | ALIPUT_00572 | Not Available | Negative | 541107 - 541838 | 27710.0 |
| nad(+)/nadh kinase | ALIPUT_00573 | Not Available | Negative | 541903 - 542784 | 31597.1 |
| pyridoxine 5'-phosphate synthase | ALIPUT_00574 | Not Available | Positive | 542910 - 543626 | 26726.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
