Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes putredinis |
| Strain | DSM 17216 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
566830 bp
Thymine Count
624780 bp
Guanine Count
708676 bp
Cytosine Count
649592 bp
Genome Length
2549878 bp
Protein-coding Genes
2704 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative cytidine deaminase | ALIPUT_00525 | Not Available | Positive | 489348 - 489887 | 20066.8 |
| pseudouridine synthase, rlua family | ALIPUT_00526 | Not Available | Positive | 489916 - 490626 | 26927.5 |
| d-tyrosyl-trna(tyr) deacylase | ALIPUT_00527 | Not Available | Positive | 490614 - 491066 | 16435.8 |
| hypothetical protein | ALIPUT_00528 | Not Available | Positive | 491063 - 491182 | 4350.27 |
| dna/rna non-specific endonuclease | ALIPUT_00529 | Not Available | Positive | 491179 - 493305 | 76573.4 |
| radical sam protein, tigr01212 family | ALIPUT_00530 | Not Available | Positive | 493314 - 494276 | 36161.3 |
| hypothetical protein | ALIPUT_00531 | Not Available | Positive | 494298 - 495278 | 34945.6 |
| hypothetical protein | ALIPUT_00532 | Not Available | Negative | 495275 - 495445 | 6482.71 |
| primosomal protein n' | ALIPUT_00533 | Not Available | Positive | 495469 - 497715 | 82860.6 |
| comf family protein | ALIPUT_00534 | Not Available | Positive | 497699 - 498409 | 25999.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
