Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes putredinis |
| Strain | DSM 17216 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
566830 bp
Thymine Count
624780 bp
Guanine Count
708676 bp
Cytosine Count
649592 bp
Genome Length
2549878 bp
Protein-coding Genes
2704 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALIPUT_02126 | Not Available | Negative | 1964321 - 1964458 | 5456.45 |
| hypothetical protein | ALIPUT_02127 | Not Available | Positive | 1964575 - 1964796 | 8407.17 |
| hypothetical protein | ALIPUT_02128 | Not Available | Negative | 1965048 - 1965341 | 10947.3 |
| trna uridine 5-carboxymethylaminomethyl modification enzyme gida | ALIPUT_02129 | Not Available | Positive | 1965359 - 1967251 | 70152.0 |
| branched-chain-amino-acid transaminase | ALIPUT_02130 | Not Available | Negative | 1967511 - 1968524 | 37312.7 |
| methionine--trna ligase | ALIPUT_02131 | Not Available | Negative | 1968573 - 1970615 | 76489.2 |
| single-stranded-dna-specific exonuclease recj | ALIPUT_02132 | Not Available | Negative | 1970833 - 1972602 | 65810.3 |
| lipoyl(octanoyl) transferase | ALIPUT_02133 | Not Available | Negative | 1972611 - 1973282 | 24914.1 |
| lipoyl synthase | ALIPUT_02134 | Not Available | Negative | 1973397 - 1974302 | 33515.4 |
| udp-glucose 4-epimerase | ALIPUT_02135 | Not Available | Negative | 1974534 - 1975556 | 37576.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
