Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes putredinis |
| Strain | DSM 17216 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
566830 bp
Thymine Count
624780 bp
Guanine Count
708676 bp
Cytosine Count
649592 bp
Genome Length
2549878 bp
Protein-coding Genes
2704 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysm domain protein | ALIPUT_01967 | Not Available | Positive | 1806641 - 1808491 | 69073.2 |
| coa binding domain protein | ALIPUT_01968 | Not Available | Positive | 1808493 - 1809146 | 24090.2 |
| riboflavin kinase | ALIPUT_01969 | Not Available | Positive | 1809154 - 1809909 | 27918.8 |
| putative tol-pal system-associated acyl-coa thioesterase | ALIPUT_01970 | Not Available | Positive | 1809914 - 1810321 | 15947.2 |
| atpase/histidine kinase/dna gyrase b/hsp90 domain protein | ALIPUT_01971 | Not Available | Negative | 1810498 - 1812558 | 78803.9 |
| thioredoxin | ALIPUT_01972 | Not Available | Negative | 1812779 - 1813093 | 11457.0 |
| dna polymerase iii, alpha subunit | ALIPUT_01973 | Not Available | Negative | 1813122 - 1816985 | 146398.0 |
| hypothetical protein | ALIPUT_01974 | Not Available | Negative | 1816882 - 1817049 | 6871.42 |
| hypothetical protein | ALIPUT_01975 | Not Available | Positive | 1817315 - 1817533 | 8088.95 |
| putative shikimate dehydrogenase | ALIPUT_01976 | Not Available | Negative | 1817763 - 1818497 | 27274.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
