Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes putredinis |
| Strain | DSM 17216 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
566830 bp
Thymine Count
624780 bp
Guanine Count
708676 bp
Cytosine Count
649592 bp
Genome Length
2549878 bp
Protein-coding Genes
2704 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase, group 2 family protein | ALIPUT_01688 | Not Available | Positive | 1530854 - 1531573 | 26635.3 |
| acetyltransferase, gnat family | ALIPUT_01689 | Not Available | Positive | 1531649 - 1532110 | 18221.9 |
| glutamine--trna ligase | ALIPUT_01690 | Not Available | Negative | 1532270 - 1533952 | 64536.5 |
| hypothetical protein | ALIPUT_01691 | Not Available | Negative | 1534000 - 1535046 | 39775.3 |
| rna methyltransferase, trmh family | ALIPUT_01692 | Not Available | Positive | 1535207 - 1535743 | 19458.4 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | ALIPUT_01693 | Not Available | Positive | 1535822 - 1536637 | 29591.8 |
| hypothetical protein | ALIPUT_01694 | Not Available | Positive | 1537097 - 1538617 | 54864.2 |
| integrase core domain protein | ALIPUT_01695 | Not Available | Negative | 1538683 - 1539459 | 31022.5 |
| hypothetical protein | ALIPUT_01696 | Not Available | Negative | 1539501 - 1540013 | 19951.6 |
| hypothetical protein | ALIPUT_01697 | Not Available | Negative | 1540072 - 1540974 | 34035.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
