Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes putredinis |
| Strain | DSM 17216 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
566830 bp
Thymine Count
624780 bp
Guanine Count
708676 bp
Cytosine Count
649592 bp
Genome Length
2549878 bp
Protein-coding Genes
2704 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trka n-terminal domain protein | ALIPUT_00088 | Not Available | Positive | 73847 - 75187 | 48749.2 |
| gh3 auxin-responsive promoter | ALIPUT_00089 | Not Available | Positive | 75255 - 76673 | 53505.8 |
| deoxynucleoside kinase | ALIPUT_00090 | Not Available | Positive | 76834 - 77460 | 24492.3 |
| nol1/nop2/sun family protein | ALIPUT_00091 | Not Available | Positive | 77496 - 78824 | 48404.8 |
| transcriptional regulator, merr family | ALIPUT_00092 | Not Available | Positive | 78836 - 79444 | 22673.1 |
| hypothetical protein | ALIPUT_00093 | Not Available | Negative | 79441 - 79665 | 7861.41 |
| dinuclear metal center protein, ybgi family | ALIPUT_00094 | Not Available | Positive | 79727 - 80527 | 29730.6 |
| putative zinc ribbon domain protein | ALIPUT_00095 | Not Available | Positive | 80537 - 81295 | 28890.5 |
| nad+ synthase | ALIPUT_00096 | Not Available | Positive | 81526 - 83109 | 58271.0 |
| positive regulator of sigma(e), rsec/mucc | ALIPUT_00097 | Not Available | Positive | 83114 - 83524 | 14380.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
