Alistipes sp.

Gram-negative

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Rikenellaceae

Genus

Alistipes

Description

Alistipes sp. is a genus of bacteria that is primarily found in the gut microbiota of various hosts. These bacteria are characterized as Gram-negative, which indicates that they possess a thin peptidoglycan layer surrounded by an outer membrane. Alistipes sp. also features flagella, which are tail-like structures that enable motility, allowing these microorganisms to navigate their environment within the gut. In terms of genetic structure, Alistipes sp. is notable for having two replicons, which suggests a level of genomic complexity that may contribute to its adaptability and functional capabilities within the gut ecosystem. The availability of genomic data for Alistipes sp. is documented under the accession numbers DPDP00000000.1 and DOQM00000000.1, providing a resource for further study of its genetic characteristics. From a biological and ecological perspective, the presence of Alistipes sp. in the gut microbiota highlights its potential role in human health and disease. Gut microbiota is crucial for processes such as digestion, metabolism, and immune function. The ability of Alistipes sp. to thrive in this niche, coupled with its motility and genetic features, suggests it may play a significant role in maintaining gut health or influencing the microbial balance, which can impact overall health outcomes. Further research into Alistipes sp. could provide insights into its specific functions and interactions within the complex ecosystem of the gut microbiome.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyRikenellaceae
GenusAlistipes
SpeciesAlistipes sp.
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgut microbiota
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Alistipes sp.


Gene Summary

Adenine Count

457498 bp

Thymine Count

438399 bp

Guanine Count

720292 bp

Cytosine Count

739961 bp

Genome Length

2369276 bp

Protein-coding Genes

1941 genes

Non-Coding Genes

42 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna recombination protein rmucDEF73_00005Not AvailablePositive1 - 33212535.5
dna recombination protein rmucDEF73_00010Not AvailablePositive536 - 7678782.31
dna recombination protein rmucDEF73_00015Not AvailablePositive984 - 165825041.6
hypothetical proteinDEF73_00020Not AvailableNegative1739 - 231121128.4
trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsabDEF73_00025Not AvailableNegative2337 - 304425246.0
had family hydrolaseDEF73_00030Not AvailableNegative3092 - 387127645.3
ssra-binding protein smpbDEF73_00035Not AvailableNegative3879 - 434017869.7
dna primaseDEF73_00040Not AvailableNegative4522 - 649574341.9
excinuclease abc subunit bDEF73_00045Not AvailablePositive6582 - 862777252.0
phenylalanine 4-monooxygenaseDEF73_00050Not AvailableNegative8766 - 925418475.7

Displaying genes 1 – 10 of 4132 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.