Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut microbiota |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
MAG TPA_asm: Alistipes sp. isolate UBA11442 contig_2401, whole
Gene Summary
Adenine Count
457498 bp
Thymine Count
438399 bp
Guanine Count
720292 bp
Cytosine Count
739961 bp
Genome Length
2369276 bp
Protein-coding Genes
1941 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-isopropylmalate dehydratase small subunit | DEF73_04135 | Not Available | Negative | 957146 - 957745 | 22650.6 |
| 3-isopropylmalate dehydratase large subunit | DEF73_04140 | Not Available | Negative | 957759 - 959156 | 49954.9 |
| 2-isopropylmalate synthase | DEF73_04145 | Not Available | Negative | 959160 - 960680 | 55359.1 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | DEF73_04150 | Not Available | Negative | 960979 - 962001 | 36869.4 |
| hypothetical protein | DEF73_04155 | Not Available | Positive | 962133 - 963914 | 66528.9 |
| protein kinase | DEF73_04160 | Not Available | Positive | 963915 - 964741 | 29812.3 |
| duf4954 domain-containing protein | DEF73_04165 | Not Available | Positive | 964784 - 966517 | 63057.3 |
| hypothetical protein | DEF73_04170 | Not Available | Positive | 966525 - 967382 | 31016.8 |
| hypothetical protein | DEF73_04175 | Not Available | Positive | 967385 - 968359 | 36126.6 |
| thioredoxin-disulfide reductase | DEF73_04180 | Not Available | Positive | 968431 - 969351 | 33109.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
