Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut microbiota |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
MAG TPA_asm: Alistipes sp. isolate UBA11442 contig_2401, whole
Gene Summary
Adenine Count
457498 bp
Thymine Count
438399 bp
Guanine Count
720292 bp
Cytosine Count
739961 bp
Genome Length
2369276 bp
Protein-coding Genes
1941 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphonate abc transporter atp-binding protein | DEF73_03830 | Not Available | Positive | 891214 - 891954 | 27765.6 |
| dna topoisomerase (atp-hydrolyzing) subunit b | DEF73_03835 | Not Available | Positive | 892011 - 893966 | 72742.3 |
| uridine kinase | DEF73_03840 | Not Available | Positive | 894110 - 894733 | 23518.4 |
| duf340 domain-containing protein | DEF73_03845 | Not Available | Positive | 895160 - 895438 | 9655.11 |
| hypothetical protein | DEF73_03850 | Not Available | Positive | 895435 - 896067 | 21601.1 |
| dna mismatch repair protein muts | DEF73_03855 | Not Available | Negative | 896205 - 898838 | 98538.5 |
| uracil-dna glycosylase family protein | DEF73_03860 | Not Available | Negative | 899002 - 899580 | 22158.6 |
| atp-dependent endonuclease | DEF73_03865 | Not Available | Negative | 899573 - 900988 | 53791.8 |
| hypothetical protein | DEF73_03870 | Not Available | Positive | 901039 - 901674 | 24159.3 |
| hypothetical protein | DEF73_03875 | Not Available | Positive | 901769 - 902260 | 17741.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
