Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut microbiota |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
MAG TPA_asm: Alistipes sp. isolate UBA11442 contig_2401, whole
Gene Summary
Adenine Count
457498 bp
Thymine Count
438399 bp
Guanine Count
720292 bp
Cytosine Count
739961 bp
Genome Length
2369276 bp
Protein-coding Genes
1941 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | DEF73_01645 | Not Available | Positive | 357937 - 358764 | 30198.2 |
| biotin--[acetyl-coa-carboxylase] ligase | DEF73_01650 | Not Available | Positive | 358772 - 359518 | 28331.7 |
| glycine cleavage system protein gcvh | DEF73_01655 | Not Available | Positive | 359563 - 359940 | 13391.7 |
| malate dehydrogenase | DEF73_01660 | Not Available | Positive | 360036 - 360977 | 33064.6 |
| transcription elongation factor grea | DEF73_01665 | Not Available | Negative | 361071 - 361547 | 17502.1 |
| outer membrane protein assembly factor bamd | DEF73_01670 | Not Available | Positive | 361790 - 362608 | 31672.4 |
| rna polymerase rpb6 | DEF73_01675 | Not Available | Positive | 362613 - 362945 | 12920.3 |
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc | DEF73_01680 | Not Available | Positive | 362959 - 364179 | 43044.1 |
| dna repair protein recn | DEF73_01685 | Not Available | Positive | 364191 - 365909 | 62202.8 |
| hypothetical protein | DEF73_01690 | Not Available | Positive | 365941 - 366534 | 22488.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
