Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut microbiota |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
MAG TPA_asm: Alistipes sp. isolate UBA11442 contig_2401, whole
Gene Summary
Adenine Count
457498 bp
Thymine Count
438399 bp
Guanine Count
720292 bp
Cytosine Count
739961 bp
Genome Length
2369276 bp
Protein-coding Genes
1941 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| holliday junction branch migration protein ruva | DER27_05260 | Not Available | Negative | 1149125 - 1149709 | 20828.4 |
| omph family outer membrane protein | DER27_05265 | Not Available | Positive | 1149806 - 1150393 | 21678.4 |
| tigr00159 family protein | DER27_05270 | Not Available | Positive | 1150681 - 1151481 | 29385.4 |
| n-acetyltransferase | DER27_05275 | Not Available | Positive | 1151504 - 1152079 | 22112.4 |
| preprotein translocase subunit secg | DER27_05280 | Not Available | Negative | 1152465 - 1152839 | 13177.4 |
| hypothetical protein | DER27_05285 | Not Available | Negative | 1152856 - 1153338 | 17792.2 |
| hypothetical protein | DER27_05290 | Not Available | Negative | 1153342 - 1153860 | 18568.0 |
| sigma-54-dependent fis family transcriptional regulator | DER27_05295 | Not Available | Negative | 1153881 - 1155092 | 45067.8 |
| hypothetical protein | DER27_05300 | Not Available | Negative | 1155134 - 1155943 | 28568.2 |
| arginine decarboxylase | DER27_05305 | Not Available | Positive | 1156169 - 1157563 | 54144.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
