Alistipes sp.

Gram-negative

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Rikenellaceae

Genus

Alistipes

Description

Alistipes sp. is a genus of bacteria that is primarily found in the gut microbiota of various hosts. These bacteria are characterized as Gram-negative, which indicates that they possess a thin peptidoglycan layer surrounded by an outer membrane. Alistipes sp. also features flagella, which are tail-like structures that enable motility, allowing these microorganisms to navigate their environment within the gut. In terms of genetic structure, Alistipes sp. is notable for having two replicons, which suggests a level of genomic complexity that may contribute to its adaptability and functional capabilities within the gut ecosystem. The availability of genomic data for Alistipes sp. is documented under the accession numbers DPDP00000000.1 and DOQM00000000.1, providing a resource for further study of its genetic characteristics. From a biological and ecological perspective, the presence of Alistipes sp. in the gut microbiota highlights its potential role in human health and disease. Gut microbiota is crucial for processes such as digestion, metabolism, and immune function. The ability of Alistipes sp. to thrive in this niche, coupled with its motility and genetic features, suggests it may play a significant role in maintaining gut health or influencing the microbial balance, which can impact overall health outcomes. Further research into Alistipes sp. could provide insights into its specific functions and interactions within the complex ecosystem of the gut microbiome.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyRikenellaceae
GenusAlistipes
SpeciesAlistipes sp.
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgut microbiota
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG TPA_asm: Alistipes sp. isolate UBA11442 contig_2401, whole

Gene Summary

Adenine Count

457498 bp

Thymine Count

438399 bp

Guanine Count

720292 bp

Cytosine Count

739961 bp

Genome Length

2369276 bp

Protein-coding Genes

1941 genes

Non-Coding Genes

42 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
holliday junction branch migration protein ruvaDER27_05260Not AvailableNegative1149125 - 114970920828.4
omph family outer membrane proteinDER27_05265Not AvailablePositive1149806 - 115039321678.4
tigr00159 family proteinDER27_05270Not AvailablePositive1150681 - 115148129385.4
n-acetyltransferaseDER27_05275Not AvailablePositive1151504 - 115207922112.4
preprotein translocase subunit secgDER27_05280Not AvailableNegative1152465 - 115283913177.4
hypothetical proteinDER27_05285Not AvailableNegative1152856 - 115333817792.2
hypothetical proteinDER27_05290Not AvailableNegative1153342 - 115386018568.0
sigma-54-dependent fis family transcriptional regulatorDER27_05295Not AvailableNegative1153881 - 115509245067.8
hypothetical proteinDER27_05300Not AvailableNegative1155134 - 115594328568.2
arginine decarboxylaseDER27_05305Not AvailablePositive1156169 - 115756354144.3

Displaying genes 3051 – 3060 of 4132 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.