Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut microbiota |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
MAG TPA_asm: Alistipes sp. isolate UBA11442 contig_2401, whole
Gene Summary
Adenine Count
457498 bp
Thymine Count
438399 bp
Guanine Count
720292 bp
Cytosine Count
739961 bp
Genome Length
2369276 bp
Protein-coding Genes
1941 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxynorspermidine decarboxylase | DEF73_01090 | Not Available | Positive | 225353 - 226483 | 42568.9 |
| cysteate synthase | DEF73_01095 | Not Available | Positive | 226509 - 227801 | 47074.2 |
| cobalamin receptor | DEF73_01100 | Not Available | Positive | 227935 - 229947 | 74689.0 |
| glutamate formimidoyltransferase | DEF73_01105 | Not Available | Positive | 230141 - 231841 | 60955.1 |
| urocanate hydratase | DEF73_01110 | Not Available | Positive | 231848 - 233869 | 75096.2 |
| histidine ammonia-lyase | DEF73_01115 | Not Available | Positive | 233885 - 235366 | 54885.2 |
| imidazolonepropionase | DEF73_01120 | Not Available | Positive | 235363 - 236616 | 45505.8 |
| methionine sulfoxide reductase | DEF73_01125 | Not Available | Positive | 236711 - 237571 | 32293.7 |
| eama family transporter | DEF73_01130 | Not Available | Positive | 237668 - 238552 | 30722.4 |
| cystathionine beta-lyase | DEF73_01135 | Not Available | Negative | 238638 - 239801 | 43710.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
