Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut microbiota |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
MAG TPA_asm: Alistipes sp. isolate UBA11442 contig_2401, whole
Gene Summary
Adenine Count
457498 bp
Thymine Count
438399 bp
Guanine Count
720292 bp
Cytosine Count
739961 bp
Genome Length
2369276 bp
Protein-coding Genes
1941 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| comf family protein | DEF73_09190 | Not Available | Negative | 2148321 - 2149043 | 26917.7 |
| primosomal protein n' | DEF73_09195 | Not Available | Negative | 2149027 - 2151285 | 83867.0 |
| yitt family protein | DEF73_09200 | Not Available | Negative | 2151285 - 2152178 | 32236.4 |
| tigr01212 family radical sam protein | DEF73_09205 | Not Available | Negative | 2152208 - 2153155 | 35793.5 |
| endonuclease | DEF73_09210 | Not Available | Negative | 2153159 - 2154424 | 45614.7 |
| d-tyrosyl-trna(tyr) deacylase | DEF73_09215 | Not Available | Negative | 2154459 - 2154911 | 16334.8 |
| rlua family pseudouridine synthase | DEF73_09220 | Not Available | Negative | 2154916 - 2155602 | 25597.6 |
| cytidine deaminase | DEF73_09225 | Not Available | Negative | 2155613 - 2156068 | 16417.5 |
| simpl domain-containing protein | DEF73_09230 | Not Available | Negative | 2156245 - 2156934 | 25485.9 |
| 23s rrna (uracil(1939)-c(5))-methyltransferase rlmd | DEF73_09235 | Not Available | Negative | 2157115 - 2158524 | 53090.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
