Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut microbiota |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
MAG TPA_asm: Alistipes sp. isolate UBA11442 contig_2401, whole
Gene Summary
Adenine Count
457498 bp
Thymine Count
438399 bp
Guanine Count
720292 bp
Cytosine Count
739961 bp
Genome Length
2369276 bp
Protein-coding Genes
1941 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-formyltetrahydrofolate cyclo-ligase | DEF73_06250 | Not Available | Negative | 1429412 - 1429945 | 18925.7 |
| succinate dehydrogenase/fumarate reductase cytochrome b subunit | DEF73_06255 | Not Available | Positive | 1430064 - 1430759 | 25434.6 |
| fumarate reductase/succinate dehydrogenase flavoprotein subunit | DEF73_06260 | Not Available | Positive | 1430797 - 1432743 | 71798.5 |
| succinate dehydrogenase/fumarate reductase iron-sulfur subunit | DEF73_06265 | Not Available | Positive | 1432783 - 1433526 | 26638.0 |
| duf4252 domain-containing protein | DEF73_06270 | Not Available | Negative | 1433731 - 1434216 | 18443.3 |
| hypothetical protein | DEF73_06275 | Not Available | Negative | 1434229 - 1435152 | 33131.8 |
| hypothetical protein | DEF73_06280 | Not Available | Negative | 1435168 - 1435635 | 17088.5 |
| rna polymerase sigma factor | DEF73_06285 | Not Available | Negative | 1435610 - 1436128 | 19910.8 |
| fructose-6-phosphate aldolase | DEF73_06290 | Not Available | Negative | 1436284 - 1436940 | 23604.5 |
| pspc family transcriptional regulator | DEF73_06295 | Not Available | Positive | 1437162 - 1437677 | 19400.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
