Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut microbiota |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
MAG TPA_asm: Alistipes sp. isolate UBA11442 contig_2401, whole
Gene Summary
Adenine Count
457498 bp
Thymine Count
438399 bp
Guanine Count
720292 bp
Cytosine Count
739961 bp
Genome Length
2369276 bp
Protein-coding Genes
1941 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-deoxy-8-phosphooctulonate synthase | DEF73_05650 | Not Available | Negative | 1267893 - 1268645 | 27359.1 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | DEF73_05655 | Not Available | Negative | 1268653 - 1269417 | 28699.1 |
| endopeptidase la | DEF73_05660 | Not Available | Negative | 1269498 - 1271927 | 90145.1 |
| valine--trna ligase | DEF73_05665 | Not Available | Positive | 1272042 - 1274669 | 99747.0 |
| ribonuclease hi | DEF73_05670 | Not Available | Positive | 1274788 - 1275249 | 17135.3 |
| antibiotic abc transporter atp-binding protein | DEF73_05675 | Not Available | Positive | 1275365 - 1277194 | 68284.0 |
| isoleucine--trna ligase | DEF73_05680 | Not Available | Positive | 1277347 - 1280832 | 132011.0 |
| molecular chaperone dnak | DEF73_05685 | Not Available | Positive | 1280923 - 1281303 | 14445.3 |
| hypothetical protein | DEF73_05690 | Not Available | Positive | 1281579 - 1283453 | 71614.2 |
| peptidase m56 | DEF73_05695 | Not Available | Negative | 1283535 - 1285457 | 71681.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
