Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut microbiota |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
MAG TPA_asm: Alistipes sp. isolate UBA11442 contig_2401, whole
Gene Summary
Adenine Count
457498 bp
Thymine Count
438399 bp
Guanine Count
720292 bp
Cytosine Count
739961 bp
Genome Length
2369276 bp
Protein-coding Genes
1941 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response regulator | DEF73_00520 | Not Available | Negative | 102010 - 102687 | 25549.2 |
| duf349 domain-containing protein | DEF73_00525 | Not Available | Positive | 102848 - 104929 | 79758.8 |
| ctp synthase | DEF73_00530 | Not Available | Positive | 105049 - 106683 | 60336.7 |
| membrane protein insertase yidc | DEF73_00535 | Not Available | Positive | 106730 - 108673 | 73412.4 |
| endo-1,4-beta-xylanase z | DEF73_00540 | Not Available | Negative | 108928 - 109773 | 31544.4 |
| class i sam-dependent rrna methyltransferase | DEF73_00545 | Not Available | Negative | 109793 - 110992 | 44811.3 |
| 3'-5' exonuclease | DEF73_00550 | Not Available | Negative | 110989 - 111444 | 17352.2 |
| 3'-5' exonuclease | DEF73_00555 | Not Available | Negative | 111676 - 111796 | 4563.37 |
| hypothetical protein | DEF73_00560 | Not Available | Positive | 111857 - 112125 | 9600.12 |
| xanthan lyase | DEF73_00565 | Not Available | Positive | 112394 - 114210 | 66734.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
