Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut microbiota |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
MAG TPA_asm: Alistipes sp. isolate UBA11442 contig_2401, whole
Gene Summary
Adenine Count
457498 bp
Thymine Count
438399 bp
Guanine Count
720292 bp
Cytosine Count
739961 bp
Genome Length
2369276 bp
Protein-coding Genes
1941 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DEF73_05400 | Not Available | Positive | 1221856 - 1222272 | 14434.4 |
| tonb-dependent receptor | DEF73_05405 | Not Available | Positive | 1222344 - 1224689 | 87750.3 |
| copper resistance protein copz | DEF73_05410 | Not Available | Positive | 1224722 - 1225069 | 12490.3 |
| hypothetical protein | DEF73_05415 | Not Available | Negative | 1225145 - 1225558 | 15396.2 |
| rna polymerase subunit sigma-70 | DEF73_05420 | Not Available | Negative | 1225542 - 1226099 | 21329.5 |
| hypothetical protein | DEF73_05425 | Not Available | Positive | 1226247 - 1226660 | 15141.1 |
| glucose-1-phosphate thymidylyltransferase | DEF73_05430 | Not Available | Positive | 1226894 - 1227787 | 32757.5 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | DEF73_05435 | Not Available | Positive | 1227784 - 1228356 | 21512.6 |
| dtdp-4-dehydrorhamnose reductase | DEF73_05440 | Not Available | Positive | 1228349 - 1229230 | 32322.3 |
| dtdp-glucose 4,6-dehydratase | DEF73_05445 | Not Available | Positive | 1229227 - 1230324 | 42275.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
