Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut microbiota |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
MAG TPA_asm: Alistipes sp. isolate UBA11442 contig_2401, whole
Gene Summary
Adenine Count
457498 bp
Thymine Count
438399 bp
Guanine Count
720292 bp
Cytosine Count
739961 bp
Genome Length
2369276 bp
Protein-coding Genes
1941 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DEF73_05250 | Not Available | Positive | 1184484 - 1185788 | 48496.1 |
| dna-binding response regulator | DEF73_05255 | Not Available | Negative | 1185796 - 1186545 | 28623.4 |
| sensor histidine kinase | DEF73_05260 | Not Available | Negative | 1186542 - 1187597 | 40462.6 |
| multidrug abc transporter substrate-binding protein | DEF73_05265 | Not Available | Negative | 1187627 - 1188847 | 44326.1 |
| abc transporter atp-binding protein | DEF73_05270 | Not Available | Negative | 1188851 - 1189594 | 27479.8 |
| efflux rnd transporter periplasmic adaptor subunit | DEF73_05275 | Not Available | Negative | 1189669 - 1190859 | 42720.4 |
| transporter | DEF73_05280 | Not Available | Negative | 1190875 - 1192191 | 48836.7 |
| sigma-70 family rna polymerase sigma factor | DEF73_05285 | Not Available | Positive | 1192613 - 1193086 | 18721.6 |
| hypothetical protein | DEF73_05290 | Not Available | Positive | 1193243 - 1193689 | 17110.4 |
| Trna-ser | Not Available | Not Available | Positive | 1194040 - 1194130 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
