Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium fabrum |
| Strain | C58 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Tracheophyta |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
1830 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrite reductase large subunit nirb | ATU_RS18180 | Not Available | Negative | 999456 - 1001903 | 89067.3 |
| abc transporter atp-binding protein | ATU_RS18185 | Not Available | Negative | 1001909 - 1002706 | 29571.2 |
| nitrate abc transporter permease | ATU_RS18190 | Not Available | Negative | 1002720 - 1003613 | 31976.7 |
| cmpa/nrta family abc transporter substrate-binding protein | ATU_RS18195 | Not Available | Negative | 1003727 - 1005019 | 46789.3 |
| cmpa/nrta family abc transporter substrate-binding protein | ATU_RS18200 | Not Available | Negative | 1005400 - 1006695 | 46256.9 |
| antar domain-containing response regulator | ATU_RS18205 | Not Available | Negative | 1006731 - 1007318 | 21800.7 |
| gntr family transcriptional regulator | ATU_RS18210 | Not Available | Negative | 1007420 - 1008085 | 24835.0 |
| nramp family divalent metal transporter | ATU_RS18215 | Not Available | Positive | 1008352 - 1009593 | 43393.3 |
| lamb/ycsf family protein | ATU_RS18220 | Not Available | Positive | 1009717 - 1010484 | 26710.9 |
| putative hydro-lyase | ATU_RS18225 | Not Available | Positive | 1010496 - 1011305 | 28938.6 |
Pathways
525 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |

