Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium fabrum |
| Strain | C58 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Tracheophyta |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
1830 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate abc transporter permease | ATU_RS13900 | Not Available | Positive | 15465 - 16346 | 32875.7 |
| extracellular solute-binding protein | ATU_RS13905 | Not Available | Positive | 16407 - 17936 | 58205.6 |
| alginate lyase | ATU_RS13910 | Not Available | Positive | 18008 - 20338 | 87875.6 |
| sdr family nad(p)-dependent oxidoreductase | ATU_RS13915 | Not Available | Positive | 20354 - 21103 | 25668.7 |
| sgnh/gdsl hydrolase family protein | ATU_RS13920 | Not Available | Positive | 21120 - 22289 | 41895.7 |
| hydroxyacid dehydrogenase | ATU_RS13925 | Not Available | Positive | 22286 - 23320 | 37665.5 |
| sugar phosphate isomerase/epimerase family protein | ATU_RS13930 | Not Available | Positive | 23413 - 24114 | 26554.7 |
| glucarate dehydratase family protein | ATU_RS13935 | Not Available | Positive | 24114 - 25361 | 45220.8 |
| hypothetical protein | ATU_RS26665 | Not Available | Negative | 25394 - 25666 | 9590.52 |
| hypothetical protein | ATU_RS13945 | Not Available | Positive | 25864 - 26082 | 8027.49 |
Pathways
396 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |

