Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium fabrum |
| Strain | C58 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Tracheophyta |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
1830 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipocalin family protein | ATU_RS22725 | Not Available | Positive | 2018638 - 2019168 | 19804.2 |
| sdr family nad(p)-dependent oxidoreductase | ATU_RS22730 | Not Available | Positive | 2019188 - 2019886 | 25002.8 |
| deor/glpr family dna-binding transcription regulator | ATU_RS22735 | Not Available | Negative | 2020610 - 2021341 | 26507.8 |
| autoinducer 2 abc transporter substrate-binding protein | ATU_RS22740 | Not Available | Positive | 2021679 - 2022725 | 37316.5 |
| sugar abc transporter atp-binding protein | ATU_RS22745 | Not Available | Positive | 2022797 - 2024296 | 54618.4 |
| abc transporter permease | ATU_RS22750 | Not Available | Positive | 2024310 - 2025287 | 34556.0 |
| abc transporter permease | ATU_RS22755 | Not Available | Positive | 2025302 - 2026300 | 35139.6 |
| aldose 1-epimerase family protein | ATU_RS22760 | Not Available | Positive | 2026305 - 2027387 | 39954.9 |
| ribokinase | ATU_RS22765 | Not Available | Positive | 2027412 - 2028350 | 33095.6 |
| deoxyribose-phosphate aldolase | ATU_RS22770 | Not Available | Positive | 2028370 - 2029329 | 34800.8 |
Pathways
396 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |

